{"id":3526772,"url":"https://alion.io/job/avenga-r-developer-bioinformatic","title":"R Developer / Bioinformatic","company":{"id":181252,"name":"Avenga","domain":"avenga.com","url":"https://alion.io/company/avenga","size_band":"5000+","is_staffing_agency":false,"employer_type":"direct","is_intermediary":false,"listed_via":null,"ats_vendor":"Teamtailor","truth_index":{"grade":"B","score":76,"open_postings":28,"ghost_share":0,"stale_share":0.964,"repost_share":0,"time_to_fill_p50_days":32,"computed_at":"2026-11-03T05:54:40Z"}},"role":"Backend","role_family":"Backend","seniority":null,"employment_type":"contractor","work_mode":"remote","remote_scope":"stated_countries","remote_scope_basis":"board_field","remote_working_hours":null,"hiring_geo_confidence":"inferred","locations":["Warsaw, Poland"],"countries":["PL"],"hiring_countries":["PL"],"hiring_countries_total":1,"salary":null,"salary_estimate":{"min_usd":54000,"max_usd":104000,"period":"year","method":"role_country_seniority_unknown","sample_n":946},"experience_years_min":null,"visa_sponsorship":false,"relocation_package":false,"has_equity":false,"technologies":[{"name":"CI/CD","optional":false},{"name":"Docker","optional":false},{"name":"FastAPI","optional":false},{"name":"ggplot2","optional":false},{"name":"Git","optional":false},{"name":"GitHub","optional":false},{"name":"GraphQL","optional":false},{"name":"Plotly","optional":false},{"name":"Python","optional":false},{"name":"R","optional":false},{"name":"Rest API","optional":false},{"name":"Unix","optional":false},{"name":"Bioconductor","optional":true},{"name":"JavaScript","optional":true},{"name":"JQuery","optional":true},{"name":"Next-Generation Sequencing","optional":true},{"name":"Selenium","optional":true},{"name":"Single-Cell Sequencing","optional":true},{"name":"SQL","optional":true}],"status":"closed","first_seen_at":"2026-10-30T13:57:39Z","employer_posted_date":null,"last_verified_at":"2026-11-01T02:25:00Z","board_verified":false,"closed_at":"2026-11-01T02:25:00Z","days_open":1,"trust":{"level":"not_scored","repost_count":null,"flags":[],"days_open":1},"description":"About the project: The project is creating web applications for the statistical analysis of preclinical studies. As part of the analysis, longitudinal data are modeled, then visualized and reported. The project involves the development and maintenance of several R and Python libraries, including integration with the study data acquisition system, user-generated data manipulation, and customization of visualizations. A separate module is used to conduct meta-analyses based on multiple studies. The analysis results are then shared with an external service via asynchronous API endpoints.\n\nDescription: \n1) Development and maintenance of multiple R/shiny applications\n2) Development and maintenance of R packages to support R/shiny applications, analytical calculations, and visualizations\n3) Development and maintenance of APIs, both REST and GraphQL endpoints\n4) Visualization of data and analysis results in ggplot2, including manipulation of built objects\n5) Saving, reading, and updating documents in a NoSQL database\n6) Writing and maintaining unit and integration tests\n7) CI/CD in GitHub Actions\n\nTechstack: \nR (shiny, R6, ggplot2, tidyverse, testthat)\n\nPython (FastAPI, pydantic, async, Motor)\n\nMongoDB z GridFS\n\nAPI (REST oraz GraphQL)\n\nDocker\n\nGithub Actions\n\nBioinformatic Mid:\n1. Minimum 2 years of experience in coding in R\n2. Experience in developing R packages\n3. Good knowledge of Shiny\n4. Good knowledge of plotly, ggplot packages\n5. Good knowledge of using version system control (Git)\n6. Good knowledge of bash command line and Unix environment\n7. Knowledge of using Docker is a plus\n8. Knowledge of HTML, JavaScript, jQuery and CSS is a plus\n9. Knowledge of mongoDB, SQL is a plus\n10. Knowledge of unit testing is a plus\n11. English at least at B2 level\n12. Good understanding of biological concepts and experimental methods commonly used in molecular biology and interest to learn more\n13. Experience with Bioconductor libraries\n14. Experience with sequencing/genomic data analysis (NGS, e.g. RNA-Seq, WGS, scRNA-Seq) and familiarity with bioinformatics tools used to process such data is a plus\n\nBioinformatic Senior:\n1. Minimum 4 years of experience in coding in R\n2. Experience in developing R packages\n3. Very good knowledge of Shiny\n4. Very good knowledge of plotly, ggplot packages\n5. Good knowledge of using version system control (Git)\n6. Good knowledge of bash command line and Unix environment\n7. Knowledge of using Docker\n8. Knowledge of HTML, JavaScript, jQuery and CSS\n9. Knowledge of mongoDB, SQL is a plus\n10. Knowledge of unit testing is a plus\n11. English at least at B2 level\n12. Good understanding of biological concepts and experimental methods commonly used in molecular biology and interest to learn more\n13. Experience with Bioconductor libraries\n14. Experience with sequencing/genomic data analysis (NGS, e.g. RNA-Seq, WGS, scRNA-Seq) and familiarity with bioinformatics tools used to process such data\n15. Good knowledge of unit testing and front-end testing (i.e. R/Selenium, phantomjs)\nTech stack\nR\nshiny\nMongoDB\nDocker\nBioinformatics tools\nPython\nAPI","description_format":"text","description_chars":3103,"description_truncated":false,"requirements":{"experience_years_min":null,"management_years_min":null,"team_size_min":null,"manages_managers":false,"education":null,"security_clearance":false,"languages":[]},"benefits":[],"hiring_locations":[{"name":"Poland","iso":"PL","kind":"country"}],"hiring_excludes":[],"relocation_offered":false,"industries":["IT Consulting & Digital Transformation","IT Outsourcing & Dedicated Teams","Custom Software Development"],"lifecycle":[{"event":"open","at":"2026-10-30T14:25:00Z"},{"event":"close","at":"2026-11-01T02:25:00Z"}],"visa":[],"liveness":null,"pay":null,"html_url":"https://alion.io/job/avenga-r-developer-bioinformatic","json_url":"https://alion.io/job/avenga-r-developer-bioinformatic.json","meta":{"generated_at":"2026-11-04T00:08:48Z","cache_seconds":300,"methodology":"https://alion.io/methodology","terms":"https://alion.io/terms","contact":"https://alion.io/contact","api":"https://alion.io/developers","about":"Alion is a live layer of people, companies and AI agents: who they are, whether they are real and active right now, what they do and how to work with them, readable by people and by agents and paid per call.","catalog":"https://alion.io/catalog.json","usage":{"tier":"crawler_verified","counted_by":"address","units_charged":1,"used_today":203,"day_limit":null,"remaining_today":null,"minute_limit":300,"resets_at":"2026-11-05T00:00:00Z"}},"offers":[{"id":"company.slices","title":"One company in depth, by slice","status":"live","price":{"credits":0.02,"usd":0.002,"plus_per_slice":{"credits":0.05,"usd":0.005}},"unit":"per company, plus each slice with data","note":"the employer in depth","call":{"mcp_tool":"get_company","arguments":{"id":181252},"rest":"https://alion.io/mcp/rest/get_company?id=181252"},"human":"https://alion.io/catalog?offer=company.slices&for=job%2Favenga-r-developer-bioinformatic"},{"id":"market.stats","title":"A market slice: pay, demand and time to fill","status":"live","price":{"credits":1,"usd":0.1},"unit":"per slice","note":"pay, demand and time to fill for this role and place","call":{"mcp_tool":"market_stats"},"human":"https://alion.io/catalog?offer=market.stats&for=job%2Favenga-r-developer-bioinformatic"},{"id":"job.search","title":"Open jobs by role, technology, place, pay and visa","status":"live","price":{"credits":0.02,"usd":0.002},"unit":"per posting in a list","note":"similar open postings","call":{"mcp_tool":"search_jobs"},"human":"https://alion.io/catalog?offer=job.search&for=job%2Favenga-r-developer-bioinformatic"},{"id":"company.verify","title":"Is this company real and active right now","status":"pilot","price":null,"unit":"per company","request":{"url":"https://alion.io/catalog/request","method":"POST","body":"{\"offer\": \"company.verify\", \"for\": \"job/avenga-r-developer-bioinformatic\", \"note\": \"what you need it for\"}"},"human":"https://alion.io/catalog?offer=company.verify&for=job%2Favenga-r-developer-bioinformatic"}],"agent":{"mcp":"https://alion.io/mcp/jobs","mcp_open":"https://alion.io/mcp/open","next":[{"tool":"get_job","arguments":{"id":3526772}},{"tool":"search_jobs","arguments":{"company":"avenga.com","detail":"compact"}},{"tool":"match_people","arguments":{"job_id":3526772},"note":"people open to offers who fit this vacancy"}],"note":"The same data through MCP tools: https://alion.io/mcp/open needs no sign-in (compact searches, postings, people); https://alion.io/mcp with an Alion account has everything. Docs: https://alion.io/developers"}}