{"id":2763623,"url":"https://alion.io/job/capgemini-data-harmonization-engineer-life-sciences","title":"Data Harmonization Engineer (Life Sciences)","company":{"id":145,"name":"Capgemini","domain":"capgemini.com","url":"https://alion.io/company/capgemini","size_band":"5000+","is_staffing_agency":false,"employer_type":"services","is_intermediary":false,"listed_via":null,"ats_vendor":"Career site","truth_index":{"grade":"B","score":80,"open_postings":1757,"ghost_share":0,"stale_share":0.784,"repost_share":0.003,"time_to_fill_p50_days":28,"computed_at":"2026-10-20T05:45:00Z"}},"role":"Data Science","role_family":"Data Science","seniority":"middle","employment_type":"full_time","work_mode":"hybrid","remote_scope":null,"remote_scope_basis":null,"remote_working_hours":null,"hiring_geo_confidence":"structured","locations":[],"countries":[],"hiring_countries":[],"hiring_countries_total":0,"salary":null,"salary_estimate":{"min_usd":25000,"max_usd":67000,"period":"year","method":"global_role_cell_scaled_by_country","sample_n":935},"experience_years_min":3,"visa_sponsorship":false,"relocation_package":false,"has_equity":false,"technologies":[{"name":"Git","optional":false},{"name":"Knowledge Graph","optional":false},{"name":"Python","optional":false},{"name":"SQL","optional":false},{"name":"AI Agents","optional":true},{"name":"AWS","optional":true},{"name":"Azure","optional":true},{"name":"Docker","optional":true},{"name":"Function Calling","optional":true},{"name":"GCP","optional":true},{"name":"Great Expectations","optional":true},{"name":"LLM","optional":true},{"name":"Machine Learning","optional":true},{"name":"Pandera","optional":true},{"name":"Prefect","optional":true},{"name":"RAG","optional":true},{"name":"Tool Use","optional":true}],"status":"live","first_seen_at":"2026-10-15T06:42:55Z","employer_posted_date":"2026-10-15","last_verified_at":"2026-10-21T02:14:52Z","board_verified":true,"closed_at":null,"days_open":5,"trust":{"level":"ok","repost_count":null,"flags":[],"days_open":5},"description":"CAPGEMINI ENGINEERING\nAt Capgemini Engineering, the world leader in engineering services, we bring together a global team of engineers, scientists, and architects to help the world’s most innovative companies unleash their potential. From autonomous cars to life-saving robots, our digital and software technology experts think outside the box as they provide unique R&D and engineering services across all industries. Join us for a career full of opportunities. Where you can make a difference. Where no two days are the same.\nYOUR ROLE\nYou will design and run pipelines that map messy, multi-source data to canonical models, standard identifiers and controlled vocabularies, and you will make sure the result is trustworthy, documented and ready for analytics, knowledge graphs and AI use cases. You are the person scientists and data engineers rely on to turn raw data into something they can query and trust.\nKey responsibilities\nBuild and maintain Python and SQL pipelines for data manipulation, transformation and integration across multiple sources\nDefine and implement source-to-canonical mappings, persistent identifiers and vocabulary alignment\nDesign and automate data quality assessment: completeness, validity, consistency, uniqueness and provenance checks\nNormalize entities (genes, diseases, phenotypes, compounds, tissues) against authoritative identifiers and ontologies\nWork with scientists, data engineers and product teams to translate scientific needs into data requirements\nDocument mappings, modelling decisions and validation rules, and keep them in version control\nInvestigate and resolve data issues at the source, and communicate their impact\nMentor junior colleagues and review their code and mappings\nYOUR PROFILE\nMSc or PhD (or equivalent professional experience) in biology, biomedical sciences, bioengineering, genetics, neuroscience, bioinformatics, computational biology or a related field\n3 to 5 years of experience in data engineering, bioinformatics or scientific data work, with real biomedical datasets\nStrong Python (pandas or similar) and SQL skills, with pipelines you built and maintained\nHands-on experience with data harmonization & mapping, vocabulary alignment and persistent identifiers\nExperience with data quality assessment and validation frameworks, with checks written as code\nSolid Git practice & branches, pull requests, meaningful commit history\nBiological reasoning about the data you handle (genes, variants, diseases, phenotypes, assays)\nClear communication with scientific and technical stakeholders\nFluent English\nPreferred qualifications:Experience with biomedical ontologies and databases such as Gene Ontology, MONDO, HPO, EFO, UBERON, ChEBI, Ensembl or UniProt\nAgentic AI experience & LLM-based agents or workflows, tool use, retrieval-augmented generation, or LLM-assisted curation and mapping, with validation of the output\nValidation frameworks (Great Expectations, Pandera, SHACL or similar)\nWorkflow orchestration (Airflow, Prefect, Snakemake, Nextflow) and Docker\nCloud platform experience (AWS, Azure or GCP)\nKnowledge of schema modelling (LinkML or equivalent), FAIR principles, RDF or SPARQL\nApplied machine learning\nExperience in pharma, biotech or another regulated research environment\nPortuguese fluency\n\nWhat we look for:Scientific curiosity paired with engineering discipline\nCritical thinking and attention to data provenance and quality\nComfort with ambiguity, and the ability to move between scientific meaning and technical implementation\nAn impact-driven mindset in a fast-paced environment\n\nWHAT YOU'LL LOVE ABOUT WORKING HERE\nJoin a multicultural and inclusive team environment.\nEnjoy a supportive atmosphere promoting work-life balance.\nEngage in exciting national and international projects.\nHybrid work.\nYour career growth is central to our mission. Our array of career growth programs and diverse professionals are crafted to support you in exploring a world of opportunities.\nTraining and certifications programs.\nHealth and life insurance.\nReferral program with bonuses for talent recommendations.\nGreat office locations.\nABOUT CAPGEMINI\nCapgemini is the business transformation partner for enterprises in the age of AI. We help organizations imagine and build an intelligent, sustainable future, combining AI, technology and human ingenuity to transform how they operate, innovate and grow. With unique end-to-end capabilities spanning strategy, technology, engineering and intelligent operations, we bring together deep industry expertise and market-leading capabilities in AI, cloud and data to turn ambition into measurable business outcomes at scale. Supported by a robust ecosystem of partners and nearly 60 years of expertise, Capgemini is a responsible and diverse global organization of over 410,000 team members in more than 50 countries.","description_format":"text","description_chars":4841,"description_truncated":false,"requirements":{"experience_years_min":3,"management_years_min":null,"team_size_min":null,"manages_managers":false,"education":{"level":"phd","optional":true},"security_clearance":false,"languages":[{"language":"Portuguese","level":"Advanced (C1)","optional":true},{"language":"English","level":"Advanced (C1)","optional":false}]},"benefits":["Hybrid work","Life insurance"],"hiring_locations":[],"hiring_excludes":[],"relocation_offered":false,"industries":["Biotechnology","Systems Integrators","Management Consulting","Engineering Services"],"lifecycle":[{"event":"open","at":"2026-10-17T03:07:43Z"}],"visa":[{"country":"US","licensed_sponsor":true,"evidence":"H-1B filings in 12 months: 2,076 · green card filings: 82","filings_12m":2076,"filings_prev_12m":2803,"green_card_filings_12m":82,"median_offered_wage_usd":132120,"route":null,"cap_exempt":false,"checked_at":"2026-10-15T11:24:14+00:00","sources":["US Department of Labor: LCA disclosure data (H-1B, H-1B1, E-3)","US Department of Labor: PERM disclosure data (green cards)"],"filings_for_role_12m":79},{"country":"CA","licensed_sponsor":true,"evidence":"Positions approved through LMIA in 12 months: 11","filings_12m":11,"filings_prev_12m":10,"green_card_filings_12m":null,"median_offered_wage_usd":null,"route":"Global Talent Stream; High Wage","cap_exempt":false,"checked_at":"2026-10-03T21:10:52+00:00","sources":["ESDC: employers issued a positive LMIA"],"filings_for_role_12m":0},{"country":"GB","licensed_sponsor":true,"evidence":"Licensed UK visa sponsor (Graduate Trainee, Skilled Worker, Senior or Specialist Worker)","filings_12m":null,"filings_prev_12m":null,"green_card_filings_12m":null,"median_offered_wage_usd":null,"route":"Global Business Mobility: Graduate Trainee; Skilled Worker; Global Business Mobility: Senior or Specialist Worker","cap_exempt":false,"checked_at":"2026-10-20T06:21:30+00:00","sources":["UK Home Office: register of licensed sponsors (workers)"],"filings_for_role_12m":0}],"liveness":{"score":63,"band":"ok","label":"Likely open","p_open":1,"p_active":0.63,"p_room":1,"age_days":4,"expected_fill_days":28,"reasons":["conf:0","stale_co","velocity","win:early","comp:brand"],"computed_at":"2026-10-20T05:45:00Z"},"pay":null,"html_url":"https://alion.io/job/capgemini-data-harmonization-engineer-life-sciences","json_url":"https://alion.io/job/capgemini-data-harmonization-engineer-life-sciences.json","meta":{"generated_at":"2026-10-21T03:08:21Z","cache_seconds":300,"methodology":"https://alion.io/methodology","terms":"https://alion.io/terms","contact":"https://alion.io/contact","api":"https://alion.io/developers","about":"Alion is a live layer of people, companies and AI agents: who they are, whether they are real and active right now, what they do and how to work with them, readable by people and by agents and paid per call.","catalog":"https://alion.io/catalog.json","usage":{"tier":"crawler_verified","counted_by":"address","units_charged":1,"used_today":4670,"day_limit":null,"remaining_today":null,"minute_limit":300,"resets_at":"2026-10-22T00:00:00Z"}},"offers":[{"id":"company.slices","title":"One company in depth, by slice","status":"live","price":{"credits":0.02,"usd":0.002,"plus_per_slice":{"credits":0.05,"usd":0.005}},"unit":"per company, plus each slice with data","note":"the employer in depth","call":{"mcp_tool":"get_company","arguments":{"id":145},"rest":"https://alion.io/mcp/rest/get_company?id=145"},"human":"https://alion.io/catalog?offer=company.slices&for=job%2Fcapgemini-data-harmonization-engineer-life-sciences"},{"id":"market.stats","title":"A market slice: pay, demand and time to fill","status":"live","price":{"credits":1,"usd":0.1},"unit":"per slice","note":"pay, demand and time to fill for this role and place","call":{"mcp_tool":"market_stats"},"human":"https://alion.io/catalog?offer=market.stats&for=job%2Fcapgemini-data-harmonization-engineer-life-sciences"},{"id":"job.search","title":"Open jobs by role, technology, place, pay and visa","status":"live","price":{"credits":0.02,"usd":0.002},"unit":"per posting in a list","note":"similar open postings","call":{"mcp_tool":"search_jobs"},"human":"https://alion.io/catalog?offer=job.search&for=job%2Fcapgemini-data-harmonization-engineer-life-sciences"},{"id":"company.verify","title":"Is this company real and active right now","status":"pilot","price":null,"unit":"per company","request":{"url":"https://alion.io/catalog/request","method":"POST","body":"{\"offer\": \"company.verify\", \"for\": \"job/capgemini-data-harmonization-engineer-life-sciences\", \"note\": \"what you need it for\"}"},"human":"https://alion.io/catalog?offer=company.verify&for=job%2Fcapgemini-data-harmonization-engineer-life-sciences"}]}