{"id":3191083,"url":"https://alion.io/job/copyright-axle-informatics-data-scientist-fellow-multi-omics-analysis","title":"Data Scientist Fellow — Multi-Omics Analysis","company":{"id":4416199,"name":"Copyright Axle Informatics","domain":"axleinfo.com","url":"https://alion.io/company/axleinfo","size_band":null,"is_staffing_agency":false,"employer_type":"direct","is_intermediary":false,"listed_via":null,"ats_vendor":"Greenhouse","truth_index":{"grade":"B","score":80,"open_postings":10,"ghost_share":0,"stale_share":1,"repost_share":0,"time_to_fill_p50_days":10,"computed_at":"2026-10-29T05:49:05Z"}},"role":"Data Science","role_family":"Data Science","seniority":"lead","employment_type":null,"work_mode":"on_site","remote_scope":null,"remote_scope_basis":null,"remote_working_hours":null,"hiring_geo_confidence":"structured","locations":["Bethesda, United States"],"countries":["US"],"hiring_countries":[],"hiring_countries_total":0,"salary":{"min":90000,"max":100000,"currency":"USD","period":"year","gross":null,"usd_annual":100000},"salary_estimate":null,"experience_years_min":null,"visa_sponsorship":false,"relocation_package":false,"has_equity":false,"technologies":[{"name":"Machine Learning","optional":false},{"name":"Python","optional":false},{"name":"Single-Cell Sequencing","optional":false}],"status":"live","first_seen_at":"2026-10-24T01:07:52Z","employer_posted_date":"2026-10-24","last_verified_at":"2026-10-29T16:35:13Z","board_verified":true,"closed_at":null,"days_open":5,"trust":{"level":"ok","repost_count":null,"flags":[],"days_open":5},"description":"(ID: 2026-3889)\nAxle is a bioscience and information technology company that offers advancements in translational research, biomedical informatics, and data science applications to research centers and healthcare organizations nationally and abroad. With experts in biomedical science, software engineering, and program management, we focus on developing and applying research tools and techniques to empower decision-making and accelerate research discoveries. We work with some of the top research organizations and facilities in the country including multiple institutes at the National Institutes of Health (NIH).\nBenefits We Offer:\n100% Medical, Dental & Vision Coverage for Employees\nPaid Time Off and Paid Holidays\n401K match up to 5%\nEducational Benefits for Career Growth\nEmployee Referral Bonus\nFlexible Spending Accounts:Healthcare (FSA)\nParking Reimbursement Account (PRK)\nDependent Care Assistant Program (DCAP)\nTransportation Reimbursement Account (TRN)\n\nPosition Overview\nThe Bioinformatics Fellow for Multi-Omics Analysis will conduct comprehensive analyses of multi-omics data generated from organoid systems and corresponding normal tissues. The incumbent will characterize organoid fidelity, identify biomarkers of successful differentiation, and develop computational frameworks for organoid quality assessment, while gaining substantive training in integrative analysis of single-cell and multi-omics data. The work is central to the SOM Center’s research objectives, and the position is intended to prepare the Fellow for an independent research career in academia, government, or industry.\nKey Responsibilities\nMulti-omics analysis. Analyze complex datasets including single-cell RNA sequencing, bulk RNA sequencing, proteomics, and metabolomics data from a range of organoid systems and their tissue counterparts.\n\nPipeline development. Develop and implement computational pipelines for data processing, quality control, and statistical analysis, and document them so that analyses are reproducible across the Center.\n\nBenchmarking. Integrate SOM-generated data with publicly available datasets in order to benchmark organoid characteristics against normal tissue profiles.\n\nMethod development. Develop and refine analytical approaches - including machine learning methods where appropriate - for classifying cellular states and assessing organoid quality, and contribute to standardized assessment protocols.\n\nCollaboration and interpretation. Work closely with experimental teams to interpret results and guide protocol optimization, and collaborate with other computational staff on cross-modality data integration.\n\nDissemination. Contribute to manuscript preparation and present findings at scientific conferences.\n\nRequired Qualifications\nEducation. Doctoral degree (PhD) in bioinformatics, computational biology, biostatistics, or a related quantitative field, completed or anticipated prior to the start of the appointment.\n\nSingle-cell analysis. Extensive experience with single-cell data analysis, including familiarity with tools such as Seurat, Scanpy, or comparable platforms.\n\nProgramming. Strong programming proficiency in R and Python, together with experience in statistical analysis and data visualization.\n\nOmics workflows. Working knowledge of proteomics and metabolomics data analysis workflows.\n\nPreferred Qualifications\nPrior experience analyzing organoid datasets.\n\nExperience with machine learning approaches for biological data, familiarity with pathway analysis tools, and knowledge of developmental biology principles.\n\nExperience with high-performance computing environments and version control systems.\n\nDisclaimer: The above description is meant to illustrate the general nature of work and level of effort being performed by individuals assigned to this position or job description. This is not restricted as a complete list of all skills, responsibilities, duties, and/or assignments required. Individuals may be required to perform duties outside of their position, job description or responsibilities as needed.\nThe diversity of Axle’s employees is a tremendous asset. We are firmly committed to providing equal opportunity in all aspects of employment and will not tolerate any illegal discrimination or harassment based on age, race, gender, religion, national origin, disability, marital status, covered veteran status, sexual orientation, status with respect to public assistance, and other characteristics protected under state, federal, or local law and to deter those who aid, abet, or induce discrimination or coerce others to discriminate.\nAccessibility: If you need an accommodation as part of the employment process please contact: \nThis role has a market-competitive salary with an anticipated base compensation range listed below. Actual salaries will vary depending on a candidate’s experience, qualifications, skills, and location.\nSalary Range\n$90,000—$100,000 USD","description_format":"text","description_chars":4959,"description_truncated":false,"requirements":{"experience_years_min":null,"management_years_min":null,"team_size_min":null,"manages_managers":false,"education":{"level":"phd","optional":false},"security_clearance":false,"languages":[]},"benefits":["401k plan"],"hiring_locations":[],"hiring_excludes":[],"relocation_offered":false,"industries":["Artificial Intelligence","Machine Learning"],"lifecycle":[{"event":"open","at":"2026-10-24T01:32:28Z"}],"visa":[],"liveness":{"score":58,"band":"ok","label":"Likely open","p_open":1,"p_active":0.61,"p_room":0.945,"age_days":5,"expected_fill_days":10,"reasons":["conf:2","stale_co","velocity","win:mid"],"computed_at":"2026-10-29T05:49:05Z"},"pay":{"stated_usd_annual":100000,"is_top_pay":false},"html_url":"https://alion.io/job/copyright-axle-informatics-data-scientist-fellow-multi-omics-analysis","json_url":"https://alion.io/job/copyright-axle-informatics-data-scientist-fellow-multi-omics-analysis.json","meta":{"generated_at":"2026-10-29T16:57:09Z","cache_seconds":300,"methodology":"https://alion.io/methodology","terms":"https://alion.io/terms","contact":"https://alion.io/contact","api":"https://alion.io/developers","about":"Alion is a live layer of people, companies and AI agents: who they are, whether they are real and active right now, what they do and how to work with them, readable by people and by agents and paid per call.","catalog":"https://alion.io/catalog.json","usage":{"tier":"crawler_verified","counted_by":"address","units_charged":1,"used_today":25304,"day_limit":null,"remaining_today":null,"minute_limit":300,"resets_at":"2026-10-30T00:00:00Z"}},"offers":[{"id":"company.slices","title":"One company in depth, by slice","status":"live","price":{"credits":0.02,"usd":0.002,"plus_per_slice":{"credits":0.05,"usd":0.005}},"unit":"per company, plus each slice with data","note":"the employer in depth","call":{"mcp_tool":"get_company","arguments":{"id":4416199},"rest":"https://alion.io/mcp/rest/get_company?id=4416199"},"human":"https://alion.io/catalog?offer=company.slices&for=job%2Fcopyright-axle-informatics-data-scientist-fellow-multi-omics-analysis"},{"id":"market.stats","title":"A market slice: pay, demand and time to fill","status":"live","price":{"credits":1,"usd":0.1},"unit":"per slice","note":"pay, demand and time to fill for this role and place","call":{"mcp_tool":"market_stats"},"human":"https://alion.io/catalog?offer=market.stats&for=job%2Fcopyright-axle-informatics-data-scientist-fellow-multi-omics-analysis"},{"id":"job.search","title":"Open jobs by role, technology, place, pay and visa","status":"live","price":{"credits":0.02,"usd":0.002},"unit":"per posting in a list","note":"similar open postings","call":{"mcp_tool":"search_jobs"},"human":"https://alion.io/catalog?offer=job.search&for=job%2Fcopyright-axle-informatics-data-scientist-fellow-multi-omics-analysis"},{"id":"company.verify","title":"Is this company real and active right now","status":"pilot","price":null,"unit":"per company","request":{"url":"https://alion.io/catalog/request","method":"POST","body":"{\"offer\": \"company.verify\", \"for\": \"job/copyright-axle-informatics-data-scientist-fellow-multi-omics-analysis\", \"note\": \"what you need it for\"}"},"human":"https://alion.io/catalog?offer=company.verify&for=job%2Fcopyright-axle-informatics-data-scientist-fellow-multi-omics-analysis"}],"agent":{"mcp":"https://alion.io/mcp/jobs","mcp_open":"https://alion.io/mcp/open","next":[{"tool":"get_job","arguments":{"id":3191083}},{"tool":"search_jobs","arguments":{"company":"axleinfo.com","detail":"compact"}},{"tool":"match_people","arguments":{"job_id":3191083},"note":"people open to offers who fit this vacancy"}],"note":"The same data through MCP tools: https://alion.io/mcp/open needs no sign-in (compact searches, postings, people); https://alion.io/mcp with an Alion account has everything. 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