Machine Learning Engineer Jobs in San Diego

Machine Learning Engineer jobs in San Diego hiring now at vetted startups and product companies on Alion, updated daily. Average salary around $218,398/year. Compare remote, hybrid and on-site positions with relocation and visa sponsorship. Browse and apply today.

San Diego
AI/ML
Data Science
Backend
Frontend
Mobile
DevOps
Web3
Games
Hardware
Robotics
Security
QA
Executive
Networking
Product
Design
Analytics
Support
Enterprise Apps
Quantum

Machinify
machinify.com
Machinify is an artificial intelligence software company headquartered in Palo Alto, California, and founded in 2016. The company provides an AI-powered operating system designed to automate healthcare payment integrity processes, including claims auditing, subrogation, and pharmacy payment accuracy. It serves major health plans across the United States, managing data for over 270 million members to identify cost savings and reduce administrative friction for payers and providers.
machinify.com • HQ: Palo Alto, United States • Business Process Automation (BPA) • Software • Insurance • Financial Services • Machine Learning • Health Care • Digital Health • Artificial Intelligence • Est. 2016
HQ: Palo Alto, United States • Business Process Automation (BPA) • Software • Insurance • Financial Services • Machine Learning • Health Care • Digital Health • Artificial Intelligence • Est. 2016
Verified live · 3 hours ago 4 months ago

Sr. Director | Engineering, ML
≈ $124k – $257k per year (Estimated) • Executive • 8+ years exp • Remote (United States) • Bachelor's Degree • Senior
Java
Python
Rust
Scala
AI/ML
LLM
LLM Evaluation
Semantic Search
Apply
Verified live · 3 hours ago 5 months ago

Staff AI Engineer
$210k – $280k per year • Staff+ • 3+ years exp • Remote (United States) • Staff
Python
TypeScript
Databases
pgvector
Pinecone
Weaviate
PostgreSQL
AI/ML
Claude
Function Calling
Gemini
LangGraph
Llama
LLM
LoRA
Mistral
Prompt Engineering
QLoRA
Qwen
RAG
LangChain
PEFT
DPO
Human-in-the-Loop
LLM Guardrails
SFT
Structured Outputs
Fine-tuning
Model Context Protocol
SGLang
vLLM
TGI
DevOps
Vector
Apply
Top 25% payVerified live · 3 hours ago 7 months ago

AI Engineer | Agentic Systems
$130k – $200k per year • Junior • 2+ years exp • Remote (United States) • Bachelor's Degree • Junior
Python
Python
Pydantic
AI/ML
Anthropic SDK
Claude
Claude Code
Gemini
LangGraph
LLM
LangChain
Anthropic
LLM Evaluation
OpenAI
OpenAI Agents SDK
OpenAI Codex
Structured Outputs
AI Agents
Multimodal AI
OCR
Apply
Report

Trace Labs
trace-labs.ai
Trace Labs is a Slovenian technology company founded in 2013 and headquartered in Ljubljana. It is the core development company behind the OriginTrail decentralised knowledge graph. The team builds data verification and artificial intelligence infrastructure.
trace-labs.ai • HQ: Ljubljana, Slovenia • Artificial Intelligence • Financial Services • AI Agents • Est. 2013
HQ: Ljubljana, Slovenia • Artificial Intelligence • Financial Services • AI Agents • Est. 2013
Open 97 daysTop 25% pay 4 months ago

Senior Computer Vision Engineer
$185k – $265k per year • Senior • Remote (United States) • Full-Time • Senior
Computer Vision
Multimodal AI
Robotics
Localization
Sensor Fusion
SLAM
Visual-Inertial Odometry
Apply
Report

Brillio
brillio.com
Brillio is a global digital technology consulting and services firm headquartered in Edison, New Jersey, and founded in 2014. The company provides a range of services including artificial intelligence engineering, data analytics, cloud infrastructure management, and product design to help enterprises modernize their digital operations. Operating across North America, Europe, and Asia, the firm serves clients in sectors such as financial services, healthcare, and retail through a network of global delivery centers and strategic technology partnerships.
brillio.com • HQ: Edison, United States • Software • Cloud Computing • Data Engineering • Data & Analytics • LLM & Generative AI • Artificial Intelligence • IT Consulting • Information Technology • Est. 2014
HQ: Edison, United States • Software • Cloud Computing • Data Engineering • Data & Analytics • LLM & Generative AI • Artificial Intelligence • IT Consulting • Information Technology • Est. 2014
Top 25% payVerified live · 1 hour ago 4 months ago

AI Architect, Principal Frontline AI Engineer - Healthcare
$200k – $300k per year • Lead • 10+ years exp • Jersey City • Remote (United States) • Architect
Python
AI/ML
AI Agents
Prompt Engineering
RAG
AutoGen
Claude
CrewAI
Embeddings
Gemini
LangChain
LangGraph
LLM
Semantic Kernel
Anthropic
OpenAI
DevOps
AWS
Azure
GCP
Cybersecurity
HIPAA
Management
ServiceNow
Marketing
Salesforce
Apply
Report

Infinity Constellation
infinity.com
Infinity Constellation is a venture studio and holding company headquartered in Melbourne, Australia. The group builds and operates a portfolio of software ventures under its own brands, including applied AI products, rather than investing passively in outside companies. It staffs each venture with dedicated engineering, design, and product teams while sharing finance, infrastructure, and hiring functions across the constellation.
infinity.com • HQ: Melbourne, Australia • LLM & Generative AI • Software • Venture Capital • Financial Services • AI Agents • Artificial Intelligence
HQ: Melbourne, Australia • LLM & Generative AI • Software • Venture Capital • Financial Services • AI Agents • Artificial Intelligence
Open 102 days 4 months ago

Senior AI Engineer (Clients) - Supernal
$70k – $100k per year • Senior • 4+ years exp • Remote (United States) • Full-Time • Senior • English
ElevenLabs
Function Calling
LLM
Prompt Engineering
RAG
AI Agents
Apply
Open 117 days 4 months ago

AI Engineer - Everest
≈ $144k – $258k per year (Estimated) • Senior • 5+ years exp • Remote (United States) • Full-Time • Senior
Go
Databases
Neo4j
AI/ML
LLM
Multimodal AI
Prompt Engineering
GraphRAG
AI Agents
RAG
Human-in-the-Loop
Model Context Protocol
DevOps
Vector
Apply
Open 137 days 5 months ago

Senior AI Engineer (Core) - Supernal
≈ $138k – $248k per year (Estimated) • Senior • Remote (United States) • Full-Time • Senior
Python
Python
Django
Databases
Chroma
pgvector
Pinecone
PostgreSQL
Qdrant
Weaviate
AI/ML
AutoGen
CrewAI
Embeddings
LangChain
LangGraph
LlamaIndex
LLM
RAG
Human-in-the-Loop
LLM Evaluation
LLM Guardrails
Text-to-Speech
AI Agents
Function Calling
DevOps
Datadog
Kubernetes
OpenTelemetry
Platform Engineering
Vector
WebRTC
Apply
Report

Rockstar
tryrockstar.com
Human-led recruiting. Reinvented with AI.For 10x Less.. Personalized, multi-step sequences sent via Rockstar or "on behalf of" your team.
tryrockstar.com • HQ: San Francisco, United States • Artificial Intelligence • Professional Services • Human Resources
HQ: San Francisco, United States • Artificial Intelligence • Professional Services • Human Resources
Verified live · 1 day ago 4 months ago

Senior AI Engineer
≈ $140k – $250k per year (Estimated) • Senior • 5+ years exp • Remote (United States) • Full-Time • Senior
Python
AI/ML
Embeddings
Fine-tuning
LLM
LoRA
NLP
Prompt Engineering
PyTorch
QLoRA
RAG
Reranking
Scikit-learn
Semantic Search
TensorFlow
Transformers
LangChain
PEFT
Hugging Face
Semantic Search
SFT
AI Agents
AutoGen
BentoML
CrewAI
LangGraph
Multimodal AI
Quantization
Ray
Ray Serve
vLLM
Triton
Knowledge Graph
DevOps
CI/CD
Docker
Kubernetes
Vector
Apply
Report

Thumbtack
thumbtack.com
Thumbtack is an American technology company headquartered in San Francisco, California, and was founded in 2008. The company operates an online marketplace that connects consumers with local service professionals for a wide range of tasks, including home improvement, event planning, and wellness services. It serves millions of customers across all 50 U.S. states, providing a platform for small business owners to manage leads and grow their client base through a mobile app and website.
thumbtack.com • HQ: San Francisco, United States • Lifestyle • Residential Real Estate • Real Estate • Online Directories & Classifieds • Internet Services • Professional Services • Commerce • Marketplaces • Est. 2008
HQ: San Francisco, United States • Lifestyle • Residential Real Estate • Real Estate • Online Directories & Classifieds • Internet Services • Professional Services • Commerce • Marketplaces • Est. 2008
Top 25% payVerified live · 3 hours ago 4 months ago

Software Engineer, AI/ML Infrastructure (US-Based)
$145k – $188k per year • Junior • 1+ year exp • Remote (United States) • Full-Time • Junior
Go
Python
Databases
DynamoDB
PostgreSQL
DevOps
CI/CD
Platform Engineering
Apply
Report

Shield AI
shield.ai
Shield AI is an American defence technology company founded in 2015 that builds autonomy software and uncrewed aircraft for military missions. Its Hivemind autonomy stack lets aircraft fly, navigate and complete objectives without GPS, a remote pilot or a communications link, which matters in contested environments where those links are jammed. Headquartered in San Diego, California, the company fields the V-BAT vertical take-off aircraft with United States and allied forces, licenses Hivemind to other manufacturers and is developing the X-BAT jet for high-end missions.
shield.ai • HQ: San Diego, United States • Space & Aerospace • Drones & UAVs • Defense AI • Military Drones • Military • Artificial Intelligence • 1001-5000 employees • Est. 2015
HQ: San Diego, United States • Space & Aerospace • Drones & UAVs • Defense AI • Military Drones • Military • Artificial Intelligence • 1001-5000 employees • Est. 2015
Top 25% payVerified live · 7 min ago 4 months ago

Senior Staff Engineer, ML Ops (R4941)
$233k – $350k per year • Staff+ • In office (San Diego, United States) • Full-Time • Staff
Go
Python
AI/ML
PyTorch
Reinforcement Learning
Transformers
Hugging Face
Ray
DevOps
Helm
Kubernetes
Platform Engineering
Terraform
Grafana
OpenTelemetry
Prometheus
SLURM
Robotics
Reinforcement Learning
Apply
Report

Confluent
confluent.io
Confluent is a data streaming technology company headquartered in Mountain View, California, and founded in 2014. The company provides a cloud-native platform based on Apache Kafka that enables organizations to process, store, and analyze real-time data streams across various environments. Publicly traded on the NASDAQ, the firm serves thousands of global customers across industries such as financial services, retail, and manufacturing through its managed cloud services and self-managed software.
confluent.io • HQ: Mountain View, United States • Big Data • Middleware Software • Software • Information Technology • Data Architecture • Cloud Computing • Data Engineering • Data & Analytics • Est. 2014
HQ: Mountain View, United States • Big Data • Middleware Software • Software • Information Technology • Data Architecture • Cloud Computing • Data Engineering • Data & Analytics • Est. 2014
$285k – $342k per year • Lead • 8+ years exp • Remote (United States) • Full-Time • Principal
LLM
LLM Guardrails
AI Agents
DevOps
Platform Engineering
Apply
Report

BetterHelp
betterhelp.com
BetterHelp is the world's largest therapy service, facilitating over 5,000,000 video sessions, voice calls, chats, and messages every month. We set on a mission to make sure everyone has easy, affordable, and private access to high-quality counsel...
betterhelp.com • HQ: Mountain View, United States • Digital Health • Health Care • Mental Health
HQ: Mountain View, United States • Digital Health • Health Care • Mental Health
Open 270 daysVerified live · 1 day ago 9 months ago

Staff ML/AI Platform Engineer
$200k – $245k per year • Staff+ • 3+ years exp • Remote (United States) • Full-Time • Staff
DynamoDB
Snowflake
AI/ML
Amazon SageMaker
Feature Store
DevOps
AWS
AWS Fargate
AWS Lambda
CI/CD
CloudFormation
Docker
Platform Engineering
Amazon ECS
Amazon S3
Apply
Report

Fathom
fathom.ai
Fathom captures, transcribes, and summarizes Zoom, Google Meet, and Microsoft Teams calls. Free for individuals, with AI-powered CRM updates for teams.
fathom.ai • Productivity Software • LLM & Generative AI • Artificial Intelligence • Est. 2020
Productivity Software • LLM & Generative AI • Artificial Intelligence • Est. 2020
Open 117 daysVerified live · 10 hours ago 4 months ago

AI Engineer - Model Performance
≈ $138k – $302k per year (Estimated) • Remote (United States) • Master's Degree • Full-Time
Python
AI/ML
Axolotl
CUDA Toolkit
Fine-tuning
LLM
LoRA
Multimodal AI
Prompt Engineering
QLoRA
Quantization
Ray
Ray Serve
SGLang
TensorRT
TensorRT-LLM
torchtune
vLLM
PEFT
PyTorch
CUDA
DPO
SFT
Speech Recognition
DevOps
GitHub
Management
Notion
Slack
Marketing
HubSpot
Apply
Report

Paradigmhealth
paradigmhealth.ai
Paradigm Health is the AI-native clinical trial platform connecting biopharma sponsors with a research-ready provider network across 2,100 care locations. Accelerate enrollment, improve data quality, and reduce site burden across Phase I-IV trials.
paradigmhealth.ai • Biotechnology • Clinical Research • Health Care
Biotechnology • Clinical Research • Health Care
Open 124 days 5 months ago

Senior Machine Learning Engineer
≈ $141k – $252k per year (Estimated) • Senior • 5+ years exp • Remote (United States) • Master's Degree • Full-Time • Senior
Python
SQL
AI/ML
Fine-tuning
LLM
DevOps
CI/CD
Apply
Report

Revstar
revstarconsulting.com
RevStar is the digital transformation partner that delivers clarity, speed, and measurable outcomes for modern businesses.
revstarconsulting.com • Austin • Toronto • New York • Seattle • San Francisco • LLM & Generative AI
Austin • Toronto • New York • Seattle • San Francisco • LLM & Generative AI
Open 130 daysVerified live · 12 min ago 5 months ago

Data & AI Engineer
≈ $129k – $281k per year (Estimated) • Remote (United States) • Bachelor's Degree • Full-Time
Python
SQL
Databases
Databricks
Delta Lake
AI/ML
MLFlow
Spark
DevOps
AWS
Azure
CI/CD
GCP
Terraform
Cybersecurity
GDPR
HIPAA
SOC 2
Analytics
ETL/ELT
Apply
Report

Yuno
yuno.ai
Yuno is an educational technology company based in San Francisco, California, and was founded in 2023. The organization develops an artificial intelligence-driven tutoring platform that provides personalized learning experiences and study assistance for students and professionals. It operates as a digital platform focusing on the integration of large language models to enhance academic performance and knowledge retention.
yuno.ai • HQ: San Francisco, United States • Higher Education • Secondary Education • Conversational AI • LLM & Generative AI • Education • Artificial Intelligence • EdTech Platforms • 201-500 employees • Est. 2023
HQ: San Francisco, United States • Higher Education • Secondary Education • Conversational AI • LLM & Generative AI • Education • Artificial Intelligence • EdTech Platforms • 201-500 employees • Est. 2023
Open 130 daysVerified live · 10 hours ago 5 months ago

Senior AI Engineer
≈ $87k – $219k per year (Estimated) • Equity • Senior • 4+ years exp • Remote (United States, Argentina, Colombia, Mexico, Chile) • Senior
Python
Databases
FAISS
Pinecone
Weaviate
AI/ML
Prompt Engineering
PyTorch
Semantic Search
TensorFlow
Whisper
Edge AI
Semantic Search
Text-to-Speech
NLP
Hugging Face
OpenAI
DevOps
AWS
Azure
GCP
Apply
Report

Interwell Health
interwellhealth.com
Interwell Health is a value-based kidney care provider that partners with physicians to revolutionize healthcare. The company focuses on offering expertise, compassion, and innovative strategies to set high standards within the kidney care industry. Interwell Health aims to slow disease progression and reduce hospitalizations, resulting in improved health outcomes and lower care costs for patients and payers.
interwellhealth.com • Health Care
Health Care
Open 184 daysVerified live · 4 hours ago 7 months ago

Machine Learning Engineer
≈ $115k – $233k per year (Estimated) • Middle • 3+ years exp • Remote (United States) • Bachelor's Degree • Middle
Python
Scala
SQL
Databases
Databricks
AI/ML
LLM
Prompt Engineering
Spark
Feature Store
LLM Guardrails
DevOps
AWS
Azure
CI/CD
GCP
Cybersecurity
HIPAA
SOC 2
Apply
Report

Whiterabbit
whiterabbit.ai
Home Products WRDensity WRRisk About Research News Contact us Request demo Our Story Since our inception, we have been dedicated to creating innovative software solutions that tackle critical challenges in the breast cancer screening process.
whiterabbit.ai • Clinical Research • Artificial Intelligence • Health Care
Clinical Research • Artificial Intelligence • Health Care
Open 136 daysVerified live · 1 day ago 5 months ago

Research Scientist Intern (2026)
Intern • Remote (United States) • Internship • Intern
Python
AI/ML
Computer Vision
Apply
Report

Horizon3
horizon3.ai
Horizon3.ai is a cybersecurity company that specializes in autonomous threat detection and proactive security validation. Its flagship platform, NodeZero, acts as an autonomous penetration testing solution that continuously discovers, tests, and verifies exploitable vulnerabilities across an organization's internal and external infrastructure. By simulating real-world attacker tactics, Horizon3.ai enables IT and security teams to fix critical security gaps before adversaries can exploit them.
horizon3.ai • Chicago • Amsterdam • San Francisco • Las Vegas • Seattle • Artificial Intelligence • Cybersecurity • Penetration Testing
Chicago • Amsterdam • San Francisco • Las Vegas • Seattle • Artificial Intelligence • Cybersecurity • Penetration Testing
Verified live · 28 min ago 5 months ago

Staff Attack Engineer, AI/LLM
$223k – $275k per year • Staff+ • Remote (United States) • Full-Time • Staff
Python
Databases
Neo4j
AI/ML
Hallucination
LLM
LLM Guardrails
Structured Outputs
AI Agents
AWS Bedrock
Vertex AI
AWS Bedrock AgentCore
OpenAI
DevOps
Vector
AWS
Azure
GCP
Cybersecurity
OWASP Top 10
Threat Modeling
Apply
Report

Eigencloud
eigencloud.xyz
EigenLayer is a restaking protocol founded in 2021 by Eigen Labs in Seattle. It lets Ethereum stakers reuse their staked collateral to secure additional services such as data availability layers, oracles and bridges. The model introduced a shared security marketplace and attracted one of the largest deposit bases in decentralised finance shortly after launch.
eigencloud.xyz • HQ: Seattle, United States
HQ: Seattle, United States
Open 151 dayTop 25% pay 5 months ago

Senior Agentic AI Engineer
$187k – $253k per year • Senior • Remote (United States) • Full-Time • Senior
Go
Python
Rust
TypeScript
AI/ML
AI Agents
LLM
Function Calling
AutoGen
CrewAI
Dagster
LangChain
DevOps
Vector
Apply
Report

Higharc
higharc.com
Higharc is the all-in-one web platform that simplifies, connects and improves each step of design, construction and sales for home building. Higharc's software solution seamlessly creates and integrates everything needed to design a home, sell ...
higharc.com • HQ: Raleigh, United States • Higher Education • Design & Creative • Artificial Intelligence
HQ: Raleigh, United States • Higher Education • Design & Creative • Artificial Intelligence
Verified live · 1 day ago 6 months ago

Research Engineer
≈ $141k – $252k per year (Estimated) • Senior • 5+ years exp • Remote (United States) • Master's Degree • Full-Time • Senior
Python
TypeScript
JavaScript
Databases
pgvector
Pinecone
Weaviate
PostgreSQL
AI/ML
Computer Vision
Fine-tuning
Hallucination
LLM
LoRA
Multimodal AI
PyTorch
QLoRA
RAG
Reinforcement Learning
Transformers
PEFT
Hugging Face
Pre-training
SFT
Frontend
React.js
Three.JS
Design
AutoCAD
Apply
Report

Seeq
seeq.com
Founded in 2013 and headquartered in Seattle, Washington, Seeq is a software company that provides software with advance analytics capabilities to the industrial process manufacturing sector including pharmaceutical.
seeq.com • HQ: Seattle, United States • Peripherals • Artificial Intelligence • Data & Analytics
HQ: Seattle, United States • Peripherals • Artificial Intelligence • Data & Analytics
Open 156 daysVerified live · 1 day ago 6 months ago

AI Customer Insights Engineer
≈ $104k – $216k per year (Estimated) • Junior • Remote (United States) • Bachelor's Degree • Full-Time
Python
SQL
AI/ML
LLM
DevOps
Azure
Analytics
Power BI
Management
Slack
Marketing
Mixpanel
Apply
Report

Serve Robotics
serverobotics.com
Why move a 2-pound burrito in a 2-ton car? Meet Serve, the future of sustainable, self-driving delivery.
serverobotics.com • HQ: Redwood City, United States • Transportation & Logistics • Delivery • Robotics
HQ: Redwood City, United States • Transportation & Logistics • Delivery • Robotics
Top 25% payVerified live · 7 hours ago 6 months ago

Lead Machine Learning Engineer
$225k – $260k per year • Lead • 5+ years exp • Columbia • Toronto • Ottawa • Calgary • Montreal • Remote (United States) • Master's Degree • Full-Time • Staff
Python
AI/ML
Computer Vision
Multimodal AI
Apply
Report
Machine Learning Engineer Jobs in San Diego
Frequently asked questions
How many Machine Learning Engineer jobs in San Diego are available on Alion?
There are currently 24 active listings from 14 hiring companies on Alion, refreshed daily.
What salary do Machine Learning Engineer jobs in San Diego pay?
The average salary is around $218,398 per year based on the current listings.
Are remote options available for Machine Learning Engineer jobs in San Diego?
Yes, many of these roles offer remote or hybrid work, and you can filter listings by remote, relocation and visa sponsorship.
How do I apply for Machine Learning Engineer jobs in San Diego?
Open any listing on Alion and apply directly with the employer through the provided link - no lengthy sign-up required.